Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015897583.1_cds_XP_016448200.1_42882
CDS Infomation

[gene=LOC107773273] [db_xref=GeneID:107773273] [protein=protein decapping 5-like] [exception=annotated by transcript or proteomic data] [protein_id=XP_016448200.1] [location=join(47284..47452,48536..48636,49812..49883,49958..50884,52058..52123,53962..54144,54249..54359,54435..>54539)] [gbkey=CDS]
Sequence

ATGGCGGCTGCGGCGACGGAGAGTTCATCGGCTAGATCTACAAGTGGAGGATCATCGGCT
GATTCGTATATTGGAAGTTTAATTAGCTTGACTTCAAAGAGTGAGATCCGTTATGAAGGC
ATTCTCTATAACATCAATACTGATGAGTCCAGTATCGGTCTTCGCAACGTAAGATCATTT
GGAACAGAGGGAAGAAAGAAGGATGGTCCTCAAGTACCTCCGAGTGACAAAATTTATGAA
TACATACTTTTCCGTGGAAGTGATATCAAGGATTTACAAGTCAAGTCTTCGCCACCTCTT
CAAACTACACCACCAATAAACAATGACCCAGCTATTATCCATTCACACTATCCTCGACCA
CCTACAACATCAGCAAGTTTACCTGCTCCTGTTGGGGGATCTTTGACGGATCTAAGTTCC
CATTCTGCACAGCCGGGACATCCTGGCTCAGCATTCCAAAGTGGCCTGCCTTTGTATCAA
CCCGGAGGGAATTTAGGATCTTGGGGTCCATCACCTCCTCCTCCAAATGCGGGTGCTGGT
GGACTTGGTATGCCAATGTATTGGCAAGGTTTTTATGGGGCACCCAATGGACTACCACAA
ATGCAGCAACAATCTTTGCTTCGTCCTCCTCCTGGACTTGCCATGCCTCCTTCCATGCCG
CAGATGCAGTTTTCTGGTTTCAATTCGTCTTTGCCAACTGGAGGATCAAGCCTACAGGCG
TCAAACTTGCCAGAATACCCTCCTTCATTGATGCCTACAACTACTAATCTAGGCGCTAGT
TCTTTATCTGCTGCTACTTTGCCTTCAACTGTGCCTCCCCTGCAACCTGTGGCACCTGTG
CCTGAAACAATATCCAGCACACTTTCAAACAAGGCTTCTGTTTCTGCTATTGCCCCATCG
ACATTAAGTGCTAGTTTACCGACTTTGCCTCCTTTGACAACCAGTCCTGATGTAAATCCT
GTTGTACCGCCAATATCTATTAAACCCAATCCAGTACCTAGCCCAGCTTTGTCTCAATCT
GTATCTACTGTCATGGGGCCATCCAGTTCTAATCTAGTGGATACACCCACACCTTCGCTG
GTAACTCCGGGGCAGCTGCTGCAATCTGGACCAATTGATGTTCCATCAACTCAATCTACT
CAGACAGCTCAAAAAGATGTTGAAGTGGTACAAGTATTGCCTGCACCATCTTCAGAAACT
CCAGCTCCTGTTAAAACAGAAGCTCAGCCACCAATATTACCATTACCACTTCAGACACGT
GTACAGAAGACAAATGGAGCTCCATATCAGGCACGTTACAACAACTACAGAGGGCGTGGC
GGAAGAGGAATGGGGGTTTCAAGACCAGTAACAAAATTCGAAGAGGATTTTGATTTTATG
GCCATGAATGAGAAGTTCAAGAAAGACGAAGTGTGGGGTCATCTTGGCAAAAGTAACAGA
GAAGGAGATGGAAATGGCAGTGACGAAGATATCTCTTTCAATGAATATGATGATGATCTT
CCTAAGATTGATGTCAAGCCTGTTTACAATAAGGATGATTTCTTCGACTCTTTGTCAAGT
AATGCACTTGATAATGACCCAAATCATGGAAGGACCAGGTTCTCTGAGCAAAGGAAGATT
GACGTTGAGACGTTTGGAGATTTCTCAAGATACAGGGGTGGCCGTGGTGGTCGTGGTCCT
GGACGTGGTGGACGTTCTCGAGGTTCGTATTATGGAAGAGGAGGATATGGAGGA

Peptide Sequence

PEP ID

XP_016448200.1
PEP Infomation

PREDICTED: protein decapping 5-like [Nicotiana tabacum]
Sequence

MAAAATESSSARSTSGGSSADSYIGSLISLTSKSEIRYEGILYNINTDESSIGLRNVRSF
GTEGRKKDGPQVPPSDKIYEYILFRGSDIKDLQVKSSPPLQTTPPINNDPAIIHSHYPRP
PTTSASLPAPVGGSLTDLSSHSAQPGHPGSAFQSGLPLYQPGGNLGSWGPSPPPPNAGAG
GLGMPMYWQGFYGAPNGLPQMQQQSLLRPPPGLAMPPSMPQMQFSGFNSSLPTGGSSLQA
SNLPEYPPSLMPTTTNLGASSLSAATLPSTVPPLQPVAPVPETISSTLSNKASVSAIAPS
TLSASLPTLPPLTTSPDVNPVVPPISIKPNPVPSPALSQSVSTVMGPSSSNLVDTPTPSL
VTPGQLLQSGPIDVPSTQSTQTAQKDVEVVQVLPAPSSETPAPVKTEAQPPILPLPLQTR
VQKTNGAPYQARYNNYRGRGGRGMGVSRPVTKFEEDFDFMAMNEKFKKDEVWGHLGKSNR
EGDGNGSDEDISFNEYDDDLPKIDVKPVYNKDDFFDSLSSNALDNDPNHGRTRFSEQRKI
DVETFGDFSRYRGGRGGRGPGRGGRSRGSYYGRGGYGGYGGNGGYGGNGGYGGNGGNGYG
YGYGGRGRGRGMPSRAS

Transcript Sequence

Gene sequence data has not been registered.